[2023-11-02 13:25:27,261 - INFO] SUPER-FOCUS: A tool for agile functional analysis of shotgun metagenomic data
[2023-11-02 13:25:27,261 - INFO] OUTPUT: out does not exist - just created it :)
[2023-11-02 13:25:27,267 - INFO] 1.1) Working on: S00OQ-0013_S92_1.fastq
[2023-11-02 13:25:27,267 - INFO]    Aligning sequences in S00OQ-0013_S92_1.fastq to 100 using diamond
[2023-11-02 15:01:56,801 - INFO]    Parsing Alignments
[2023-11-02 15:08:30,646 - INFO] 1.2) Working on: S00OQ-0005_S84_1.fastq
[2023-11-02 15:08:30,646 - INFO]    Aligning sequences in S00OQ-0005_S84_1.fastq to 100 using diamond
[2023-11-02 15:17:14,393 - INFO]    Parsing Alignments
[2023-11-02 15:17:40,522 - INFO] 1.3) Working on: S00OQ-0009_S88_1.fastq
[2023-11-02 15:17:40,522 - INFO]    Aligning sequences in S00OQ-0009_S88_1.fastq to 100 using diamond
[2023-11-02 16:29:01,613 - INFO]    Parsing Alignments
[2023-11-02 16:32:37,764 - INFO] 1.4) Working on: S00OQ-0011_S90_1.fastq
[2023-11-02 16:32:37,765 - INFO]    Aligning sequences in S00OQ-0011_S90_1.fastq to 100 using diamond
[2023-11-02 18:42:13,484 - INFO]    Parsing Alignments
[2023-11-02 18:50:43,195 - INFO] 1.5) Working on: S00OQ-0014_S93_1.fastq
[2023-11-02 18:50:43,195 - INFO]    Aligning sequences in S00OQ-0014_S93_1.fastq to 100 using diamond
[2023-11-02 20:12:08,825 - INFO]    Parsing Alignments
[2023-11-02 20:17:31,207 - INFO] 1.6) Working on: S00OQ-0015_S94_1.fastq
[2023-11-02 20:17:31,207 - INFO]    Aligning sequences in S00OQ-0015_S94_1.fastq to 100 using diamond
[2023-11-02 22:07:49,132 - INFO]    Parsing Alignments
[2023-11-02 22:14:52,121 - INFO] 1.7) Working on: S00OQ-0006_S85_1.fastq
[2023-11-02 22:14:52,121 - INFO]    Aligning sequences in S00OQ-0006_S85_1.fastq to 100 using diamond
[2023-11-02 23:51:44,346 - INFO]    Parsing Alignments
[2023-11-02 23:56:55,180 - INFO] 1.8) Working on: S00OQ-0004_S83_1.fastq
[2023-11-02 23:56:55,180 - INFO]    Aligning sequences in S00OQ-0004_S83_1.fastq to 100 using diamond
[2023-11-03 00:04:54,617 - INFO]    Parsing Alignments
[2023-11-03 00:05:16,972 - INFO] 1.9) Working on: S00OQ-0003_S82_1.fastq
[2023-11-03 00:05:16,973 - INFO]    Aligning sequences in S00OQ-0003_S82_1.fastq to 100 using diamond
[2023-11-03 00:19:21,306 - INFO]    Parsing Alignments
[2023-11-03 00:20:08,829 - INFO] 1.10) Working on: S00OQ-0010_S89_1.fastq
[2023-11-03 00:20:08,830 - INFO]    Aligning sequences in S00OQ-0010_S89_1.fastq to 100 using diamond
[2023-11-03 01:58:34,711 - INFO]    Parsing Alignments
[2023-11-03 02:03:58,476 - INFO] 1.11) Working on: S00OQ-0008_S87_1.fastq
[2023-11-03 02:03:58,476 - INFO]    Aligning sequences in S00OQ-0008_S87_1.fastq to 100 using diamond
[2023-11-03 03:02:14,145 - INFO]    Parsing Alignments
[2023-11-03 03:05:22,196 - INFO] 1.12) Working on: S00OQ-0012_S91_1.fastq
[2023-11-03 03:05:22,196 - INFO]    Aligning sequences in S00OQ-0012_S91_1.fastq to 100 using diamond
[2023-11-03 04:57:56,197 - INFO]    Parsing Alignments
[2023-11-03 05:05:16,652 - INFO] 1.13) Working on: S00OQ-0002_S81_1.fastq
[2023-11-03 05:05:16,653 - INFO]    Aligning sequences in S00OQ-0002_S81_1.fastq to 100 using diamond
[2023-11-03 05:29:09,606 - INFO]    Parsing Alignments
[2023-11-03 05:30:36,338 - INFO] 1.14) Working on: S00OQ-0001_S80_1.fastq
[2023-11-03 05:30:36,339 - INFO]    Aligning sequences in S00OQ-0001_S80_1.fastq to 100 using diamond
[2023-11-03 05:45:54,637 - INFO]    Parsing Alignments
[2023-11-03 05:46:44,169 - INFO] 1.15) Working on: S00OQ-0007_S86_1.fastq
[2023-11-03 05:46:44,169 - INFO]    Aligning sequences in S00OQ-0007_S86_1.fastq to 100 using diamond
[2023-11-03 06:34:15,969 - INFO]    Parsing Alignments
[2023-11-03 06:36:09,823 - INFO] Writting results at out
[2023-11-03 06:36:09,823 - INFO]   Working on subsystem level 1
[2023-11-03 06:36:09,876 - INFO]   Working on subsystem level 2
[2023-11-03 06:36:09,961 - INFO]   Working on subsystem level 3
[2023-11-03 06:36:10,061 - INFO]   Working on Combined output
[2023-11-03 06:36:10,937 - INFO] Done
